Molecular microbiology

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Molecular microbiology

Aerssens C, De Vos D, Pirnay JP, Yansouni C, Clerinx J, Van Gompel A, Soentjens P.

Schistosomiasis in Belgian military personnel returning from the Democratic Republic of Congo.

Mil Med. 2011 Nov;176(11):1341-6.


Riou M, Carbonnelle S, Avrain L, Mesaros N, Pirnay JP, Bilocq F, De Vos D, Simon A, Piérard D, Jacobs F, Dediste A, Tulkens PM, Van Bambeke F, Glupczynski Y.

In vivo development of antimicrobial resistance in Pseudomonas aeruginosa strains isolated from the lower respiratory tract of Intensive Care Unit patients with nosocomial pneumonia and receiving antipseudomonal therapy.

Int J Antimicrob Agents. 2010 Dec;36(6):513-22.


Lemaire S, Kosowska-Shick K, Appelbaum PC, Verween G, Tulkens PM, Van Bambeke F.

Cellular pharmacodynamics of the novel biaryloxazolidinone radezolid: studies with infected phagocytic and nonphagocytic cells, using Staphylococcus aureus, Staphylococcus epidermidis, Listeria monocytogenes, and Legionella pneumophila.

Antimicrob Agents Chemother. 2010 Jun;54(6):2549-59.


Deschaght P, De Baere T, Van Simaey L, Van Daele S, De Baets F, De Vos D, Pirnay JP, Vaneechoutte M.

Comparison of the sensitivity of culture, PCR and quantitative real-time PCR for the detection of Pseudomonas aeruginosa in sputum of cystic fibrosis patients.

BMC Microbiol. 2009 Nov 29;9:244.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2789735/


Pirnay JP, Bilocq F, Pot B, Cornelis P, Zizi M, Van Eldere J, Deschaght P, Vaneechoutte M, Jennes S, Pitt T, De Vos D.

Pseudomonas aeruginosa population structure revisited.

PLoS One. 2009 Nov 13;4(11):e7740.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2777410/


Bodilis J, Ghysels B, Osayande J, Matthijs S, Pirnay JP, Denayer S, De Vos D, Cornelis P.

Distribution and evolution of ferripyoverdine receptors in Pseudomonas aeruginosa.

Environ Microbiol. 2009 Aug;11(8):2123-35. Epub 2009 Apr 21.


Verstraelen H, Verhelst R, Nuytinck L, Roelens K, De Meester E, De Vos D, Van Thielen M, Rossau R, Delva W, De Backer E, Vaneechoutte M, Temmerman M.

Gene polymorphisms of Toll-like and related recognition receptors in relation to the vaginal carriage of Gardnerella vaginalis and Atopobium vaginae.

J Reprod Immunol. 2009 Jan;79(2):163-73.


Jannes G, De Vos D.

A review of current and future molecular diagnostic tests for use in the microbiology laboratory.

Methods Mol Biol. 2006;345:1-21.


Pirnay JP, Matthijs S, Colak H, Chablain P, Bilocq F, Van Eldere J, De Vos D, Zizi M, Triest L, Cornelis P.

Global Pseudomonas aeruginosa biodiversity as reflected in a Belgian river.

Environ Microbiol. 2005 Jul;7(7):969-80.


Pirnay JP, De Vos D, Zizi M, Heyman P.

No easy way to exterminate 'superbugs' at the dawn of the third millennium.

Expert Rev Anti Infect Ther. 2003 Dec;1(4):523-5.


Heyman P, Plyusnina A, Berny P, Cochez C, Artois M, Zizi M, Pirnay JP, Plyusnin A.

Seoul hantavirus in Europe: first demonstration of the virus genome in wild Rattus norvegicus captured in France.

Eur J Clin Microbiol Infect Dis. 2004 Sep;23(9):711-7.


Pirnay JP, De Vos D, Cochez C, Bilocq F, Pirson J, Struelens M, Duinslaeger L, Cornelis P, Zizi M, Vanderkelen A.

Molecular epidemiology of Pseudomonas aeruginosa colonization in a burn unit: persistence of a multidrug-resistant clone and a silver sulfadiazine-resistant clone.

J Clin Microbiol. 2003 Mar;41(3):1192-202.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC150314/


Ghysels B, Dieu BT, Beatson SA, Pirnay JP, Ochsner UA, Vasil ML, Cornelis P.

FpvB, an alternative type I ferripyoverdine receptor of Pseudomonas aeruginosa.

Microbiology. 2004 Jun;150(Pt 6):1671-80.

http://mic.sgmjournals.org/content/150/6/1671.long


Pirnay JP, De Vos D, Cochez C, Bilocq F, Vanderkelen A, Zizi M, Ghysels B, Cornelis P.

Pseudomonas aeruginosa displays an epidemic population structure.

Environ Microbiol. 2002 Dec;4(12):898-911.


Pirnay JP, De Vos D, Mossialos D, Vanderkelen A, Cornelis P, Zizi M.

Analysis of the Pseudomonas aeruginosa oprD gene from clinical and environmental isolates.

Environ Microbiol. 2002 Dec;4(12):872-82.


Mossialos D, Ochsner U, Baysse C, Chablain P, Pirnay JP, Koedam N, Budzikiewicz H, Fernández DU, Schäfer M, Ravel J, Cornelis P.

Identification of new, conserved, non-ribosomal peptide synthetases from fluorescent pseudomonads involved in the biosynthesis of the siderophore pyoverdine.

Mol Microbiol. 2002 Sep;45(6):1673-85.


De Vos D, De Chial M, Cochez C, Jansen S, Tümmler B, Meyer JM, Cornelis P.

Study of pyoverdine type and production by Pseudomonas aeruginosa isolated from cystic fibrosis patients: prevalence of type II pyoverdine isolates and accumulation of pyoverdine-negative mutations.

Arch Microbiol. 2001 May;175(5):384-8.


Baysse C, De Vos D, Naudet Y, Vandermonde A, Ochsner U, Meyer JM, Budzikiewicz H, Schäfer M, Fuchs R, Cornelis P.

Vanadium interferes with siderophore-mediated iron uptake in Pseudomonas aeruginosa.

Microbiology. 2000 Oct;146 (Pt 10):2425-34.

http://mic.sgmjournals.org/content/146/10/2425.long


Pirnay JP, De Vos D, Duinslaeger L, Reper P, Vandenvelde C, Cornelis P, Vanderkelen A.

Quantitation of Pseudomonas aeruginosa in wound biopsy samples: from bacterial culture to rapid 'real-time' polymerase chain reaction.

Crit Care. 2000;4(4):255-61.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC29046/


De Vos D, Bouton C, Sarniguet A, De Vos P, Vauterin M, Cornelis P.

Sequence diversity of the oprI gene, coding for major outer membrane lipoprotein I, among rRNA group I pseudomonads.

J Bacteriol. 1998 Dec;180(24):6551-6.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC107757/


De Vos D, Lim A Jr, Pirnay JP, Duinslaeger L, Revets H, Vanderkelen A, Hamers R, Cornelis P.

Analysis of epidemic Pseudomonas aeruginosa isolates by isoelectric focusing of pyoverdine and RAPD-PCR: modern tools for an integrated anti-nosocomial infection strategy in burn wound centres.

Burns. 1997 Aug;23(5):379-86.


De Vos D, Lim A Jr, Pirnay JP, Struelens M, Vandenvelde C, Duinslaeger L, Vanderkelen A, Cornelis P.

Direct detection and identification of Pseudomonas aeruginosa in clinical samples such as skin biopsy specimens and expectorations by multiplex PCR based on two outer membrane lipoprotein genes, oprI and oprL.

J Clin Microbiol. 1997 Jun;35(6):1295-9.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC229737/


Lim A Jr, De Vos D, Brauns M, Mossialos D, Gaballa A, Qing D, Cornelis P.

Molecular and immunological characterization of OprL, the 18 kDa outer-membrane peptidoglycan-associated lipoprotein (PAL) of Pseudomonas aeruginosa.

Microbiology. 1997 May;143 (Pt 5):1709-16.

http://mic.sgmjournals.org/content/143/5/1709.long


Meyer JM, Stintzi A, De Vos D, Cornelis P, Tappe R, Taraz K, Budzikiewicz H.

Use of siderophores to type pseudomonads: the three Pseudomonas aeruginosa pyoverdine systems.

Microbiology. 1997 Jan;143 (Pt 1):35-43.

http://mic.sgmjournals.org/content/143/1/35.long


De Vos D, Lim A Jr, De Vos P, Sarniguet A, Kersters K, Cornelis P.

Detection of the outer membrane lipoprotein I and its gene in fluorescent and non-fluorescent pseudomonads: implications for taxonomy and diagnosis.

J Gen Microbiol. 1993 Sep;139(9):2215-23.

http://mic.sgmjournals.org/content/139/9/2215.long

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